Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
SARC rs9582657 chr13:103768820 C/T 0 258 32.13 31.57 1.07 KM Plot
SARC rs9587001 chr13:106533145 C/T 0 258 31.97 30.43 1.07 KM Plot
SARC rs9610992 chr22:39040845 C/G 8.59E-5 258 33.17 24.13 18.33 KM Plot
SARC rs9611015 chr22:39133659 G/A 2.64E-5 257 33.18 25.57 19.02 KM Plot
SARC rs9789086 chr17:35028453 G/A 9.88E-9 248 31.27 37.08 9.47 KM Plot
SARC rs9807106 chr17:45457102 G/T 7.04E-5 257 19.83 34 32.13 KM Plot
SARC rs9861324 chr3:71933353 T/C 3.56E-6 250 16.17 38.07 30.75 KM Plot
SARC rs9874517 chr3:53128371 A/G 0 252 32.35 26.82 2.13 KM Plot
SARC rs9894594 chr17:45461383 A/G 7.04E-5 257 19.83 34 32.13 KM Plot
SARC rs9895509 chr17:45549618 A/T 1.69E-5 258 33.18 33.6 19.57 KM Plot
SARC rs9895776 chr17:45486003 A/G 8.85E-5 258 19.97 34 32.35 KM Plot
SARC rs9897507 chr17:48160255 C/T 1.99E-5 250 31.1 33.88 9.27 KM Plot
SARC rs9899859 chr17:45513049 A/G 9.98E-5 257 19.97 34 32.4 KM Plot
SARC rs9900123 chr17:45549055 T/C 8.95E-5 258 19.97 33.18 32.6 KM Plot
SARC rs9905073 chr17:45468296 G/A 7.04E-5 257 19.83 34 32.13 KM Plot